Index

A

add_poisson_and_read_out_noise() (spectractor.simulation.image_simulation.ImageModel method) adjust_spectrogram_position_parameters() (spectractor.extractor.extractor.FullForwardModelFitWorkspace method) airmass (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) amplitude (spectractor.simulation.image_simulation.StarModel attribute) amplitude_covariance() (spectractor.extractor.chromaticpsf.ChromaticPSFFitWorkspace method) (spectractor.extractor.extractor.FullForwardModelFitWorkspace method) amplitude_derivatives() (spectractor.extractor.chromaticpsf.ChromaticPSFFitWorkspace method) (spectractor.extractor.extractor.FullForwardModelFitWorkspace method) apply_max_width_to_bounds() (spectractor.extractor.psf.DoubleMoffat method) (spectractor.extractor.psf.Gauss method) (spectractor.extractor.psf.Moffat method) (spectractor.extractor.psf.MoffatGauss method) (spectractor.extractor.psf.Order0 method) (spectractor.extractor.psf.PSF method)

apply_rebinning_to_parameters() (in module spectractor.config) ArcLamp (class in spectractor.extractor.targets) Atmosphere (class in spectractor.simulation.atmosphere) AtmosphereGrid (class in spectractor.simulation.atmosphere) axis_name (spectractor.fit.fitter.FitParameter attribute), [1] axis_names (spectractor.fit.fitter.FitParameters attribute), [1]

B

BackgroundModel (class in spectractor.simulation.image_simulation) bounds (spectractor.fit.fitter.FitParameter attribute), [1] (spectractor.fit.fitter.FitParameters attribute), [1] build_CTIO_gain_map() (in module spectractor.extractor.images) build_CTIO_read_out_noise_map() (in module spectractor.extractor.images) build_detected_line_table() (spectractor.extractor.spectroscopy.Lines method) build_hologram() (in module spectractor.extractor.dispersers)

build_interpolated_functions() (spectractor.extractor.psf.Order0 method) build_psf_cube() (spectractor.extractor.chromaticpsf.ChromaticPSF method) build_psf_cube_masked() (spectractor.extractor.chromaticpsf.ChromaticPSF method) build_psf_jacobian() (spectractor.extractor.chromaticpsf.ChromaticPSF method) build_ronchi() (in module spectractor.extractor.dispersers) build_sed() (spectractor.extractor.targets.Star method) build_sparse_dM() (spectractor.extractor.chromaticpsf.ChromaticPSF method) build_sparse_M() (spectractor.extractor.chromaticpsf.ChromaticPSF method)

C

calibrate_spectrum() (in module spectractor.extractor.spectrum) camera_angle (spectractor.extractor.spectrum.Spectrum attribute) check_statistical_error() (spectractor.extractor.images.Image method) chisq() (spectractor.fit.fitter.FitWorkspace method) cholesky_solve() (in module spectractor.tools) chromatic_psf (spectractor.extractor.spectrum.Spectrum attribute) ChromaticPSF (class in spectractor.extractor.chromaticpsf) ChromaticPSFFitWorkspace (class in spectractor.extractor.chromaticpsf) clean_simulation_directory() (in module spectractor.simulation.libradtran) clean_target_spikes() (in module spectractor.tools) compute() (spectractor.simulation.atmosphere.AtmosphereGrid method) (spectractor.simulation.image_simulation.ImageModel method) compute_correlation_matrix() (in module spectractor.tools) compute_disp_axis_in_spectrogram() (spectractor.extractor.spectrum.Spectrum method) compute_dispersion_in_spectrogram() (spectractor.extractor.spectrum.Spectrum method)

compute_fwhm() (in module spectractor.tools) compute_integral() (in module spectractor.tools) compute_lambdas_in_spectrogram() (spectractor.extractor.spectrum.Spectrum method) compute_parallactic_angle() (spectractor.extractor.images.Image method) compute_rotation_angle_hessian() (in module spectractor.extractor.images) compute_statistical_error() (spectractor.extractor.images.Image method) compute_W_with_model_error() (spectractor.fit.fitter.FitWorkspace method) convert_from_ADUrate_to_flam() (spectractor.extractor.spectrum.Spectrum method) convert_from_flam_to_ADUrate() (spectractor.extractor.spectrum.Spectrum method) convert_to_ADU_rate_units() (spectractor.extractor.images.Image method) convert_to_ADU_units() (spectractor.extractor.images.Image method) convolve_psf_cube_masked() (spectractor.extractor.chromaticpsf.ChromaticPSF static method) cov_matrix (spectractor.extractor.spectrum.Spectrum attribute) crop_spectrogram() (spectractor.fit.fit_spectrogram.SpectrogramFitWorkspace method) crop_table() (spectractor.extractor.chromaticpsf.ChromaticPSF method)

D

data (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) data_next_order (spectractor.extractor.spectrum.Spectrum attribute) data_rotated (spectractor.extractor.images.Image attribute) date_obs (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) dec (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) default() (spectractor.tools.NumpyArrayEncoder method)

detect_lines() (in module spectractor.extractor.spectrum) detect_peaks() (in module spectractor.tools) dichotomie() (in module spectractor.tools) Disperser (class in spectractor.extractor.dispersers) disperser (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) disperser_label (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) DoubleMoffat (class in spectractor.extractor.psf) dumpParameters() (in module spectractor.extractor.extractor)

E

ensure_dir() (in module spectractor.tools) err (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) (spectractor.fit.fitter.FitParameter attribute), [1] (spectractor.fit.fitter.FitParameters property) err_next_order (spectractor.extractor.spectrum.Spectrum attribute) err_rotated (spectractor.extractor.images.Image attribute) evaluate() (spectractor.extractor.chromaticpsf.ChromaticPSF method) (spectractor.extractor.psf.DoubleMoffat method) (spectractor.extractor.psf.Gauss method) (spectractor.extractor.psf.Moffat method) (spectractor.extractor.psf.MoffatGauss method) (spectractor.extractor.psf.Order0 method) (spectractor.extractor.psf.PSF method) evaluate_doublemoffat1d() (in module spectractor.extractor.psf) evaluate_doublemoffat1d_jacobian() (in module spectractor.extractor.psf) evaluate_doublemoffat2d() (in module spectractor.extractor.psf) evaluate_doublemoffat2d_jacobian() (in module spectractor.extractor.psf)

evaluate_gauss1d() (in module spectractor.extractor.psf) evaluate_gauss1d_jacobian() (in module spectractor.extractor.psf) evaluate_gauss2d() (in module spectractor.extractor.psf) evaluate_gauss2d_jacobian() (in module spectractor.extractor.psf) evaluate_moffat1d() (in module spectractor.extractor.psf) evaluate_moffat1d_jacobian() (in module spectractor.extractor.psf) evaluate_moffat1d_normalisation() (in module spectractor.extractor.psf) evaluate_moffat1d_normalisation_dalpha() (in module spectractor.extractor.psf) evaluate_moffat2d() (in module spectractor.extractor.psf) evaluate_moffat2d_jacobian() (in module spectractor.extractor.psf) evaluate_moffatgauss1d() (in module spectractor.extractor.psf) evaluate_moffatgauss1d_jacobian() (in module spectractor.extractor.psf) evaluate_moffatgauss2d() (in module spectractor.extractor.psf) evaluate_moffatgauss2d_jacobian() (in module spectractor.extractor.psf) expo (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) extra (spectractor.fit.fitter.FitParameters attribute) extract_spectrum_from_image() (in module spectractor.extractor.extractor)

F

fast_load (spectractor.extractor.spectrum.Spectrum attribute) fftconvolve_gaussian() (in module spectractor.tools) file_name (spectractor.extractor.images.Image attribute) filename (spectractor.fit.fitter.FitParameters attribute), [1] fill_table_with_profile_params() (spectractor.extractor.chromaticpsf.ChromaticPSF method) filter_label (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) filter_stars_from_bgd() (in module spectractor.tools) find_nearest() (in module spectractor.tools) find_order01_positions() (in module spectractor.extractor.dispersers) find_target() (in module spectractor.extractor.images) find_target_1Dprofile() (in module spectractor.extractor.images) find_target_after_rotation() (in module spectractor.extractor.images) find_target_init() (in module spectractor.extractor.images) find_target_Moffat2D() (in module spectractor.extractor.images) fit_chromatic_psf() (spectractor.extractor.chromaticpsf.ChromaticPSF method) fit_gauss() (in module spectractor.tools) fit_gauss2d_outlier_removal() (in module spectractor.tools) fit_moffat1d() (in module spectractor.tools) fit_moffat1d_outlier_removal() (in module spectractor.tools) fit_moffat2d_outlier_removal() (in module spectractor.tools) fit_multigauss_and_bgd() (in module spectractor.tools) fit_multigauss_and_line() (in module spectractor.tools) fit_poly1d() (in module spectractor.tools) fit_poly1d_legendre() (in module spectractor.tools)

fit_poly1d_outlier_removal() (in module spectractor.tools) fit_poly2d() (in module spectractor.tools) fit_poly2d_outlier_removal() (in module spectractor.tools) fit_psf() (spectractor.extractor.psf.PSF method) fit_transverse_PSF1D_profile() (spectractor.extractor.chromaticpsf.ChromaticPSF method) FitParameter (class in spectractor.fit.fitter) FitParameters (class in spectractor.fit.fitter) FitWorkspace (class in spectractor.fit.fitter) fixed (spectractor.fit.fitter.FitParameter attribute), [1] (spectractor.fit.fitter.FitParameters attribute), [1] flat (spectractor.extractor.images.Image attribute) flat_rotated (spectractor.extractor.images.Image attribute) FlatModel (class in spectractor.simulation.image_simulation) flip_and_rotate_radec_vector_to_xy_vector() (in module spectractor.tools) formatting_numbers() (in module spectractor.tools) frame (spectractor.simulation.image_simulation.BackgroundModel attribute) from_config_to_dict() (in module spectractor.config) from_config_to_parameters() (in module spectractor.config) from_lambda_to_colormap() (in module spectractor.tools) from_poly_params_to_profile_params() (spectractor.extractor.chromaticpsf.ChromaticPSF method) from_profile_params_to_poly_params() (spectractor.extractor.chromaticpsf.ChromaticPSF method) from_profile_params_to_shape_params() (spectractor.extractor.chromaticpsf.ChromaticPSF method) from_table_to_poly_params() (spectractor.extractor.chromaticpsf.ChromaticPSF method) from_table_to_profile_params() (spectractor.extractor.chromaticpsf.ChromaticPSF method) FullForwardModelFitWorkspace (class in spectractor.extractor.extractor)

G

gains (spectractor.simulation.image_simulation.FlatModel attribute) Gauss (class in spectractor.extractor.psf) gauss() (in module spectractor.tools) gauss_jacobian() (in module spectractor.tools) gaussian_model() (spectractor.extractor.spectroscopy.Line method) generate_test_poly_params() (spectractor.extractor.chromaticpsf.ChromaticPSF method) get_algebraic_distance_along_dispersion_axis() (spectractor.extractor.chromaticpsf.ChromaticPSF method) get_bad_indices() (spectractor.fit.fitter.FitWorkspace method) get_delta_pix_ortho() (in module spectractor.extractor.dispersers) get_fixed_parameters() (spectractor.fit.fitter.FitParameters method) get_free_parameters() (spectractor.fit.fitter.FitParameters method) get_index() (spectractor.fit.fitter.FitParameters method)

get_N() (in module spectractor.extractor.dispersers) get_parameter() (spectractor.fit.fitter.FitParameters method) get_radec_position_after_pm() (spectractor.extractor.targets.Star method) get_refraction_angle() (in module spectractor.extractor.dispersers) get_sparse_indices() (spectractor.extractor.chromaticpsf.ChromaticPSF method) get_spectrogram_truth() (spectractor.fit.fit_spectrogram.SpectrogramFitWorkspace method) get_theta0() (in module spectractor.extractor.dispersers) get_uvspec_binary() (in module spectractor.tools) gradient_descent() (in module spectractor.fit.fitter) grating_lambda_to_pixel() (spectractor.extractor.dispersers.Disperser method) grating_pixel_to_lambda() (spectractor.extractor.dispersers.Disperser method) grating_refraction_angle_to_lambda() (spectractor.extractor.dispersers.Disperser method) grating_resolution() (spectractor.extractor.dispersers.Disperser method)

H

header (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) hessian() (spectractor.fit.fitter.FitWorkspace method) hessian_and_theta() (in module spectractor.tools)

Hologram (class in spectractor.extractor.dispersers) hour_angle (spectractor.extractor.images.Image attribute) humidity (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute)

I

Image (class in spectractor.extractor.images) ImageModel (class in spectractor.simulation.image_simulation) ImageSim() (in module spectractor.simulation.image_simulation)

imgslice() (in module spectractor.tools) init_from_table() (spectractor.extractor.chromaticpsf.ChromaticPSF method) iraf_source_detection() (in module spectractor.tools)

J

jacobian() (spectractor.extractor.chromaticpsf.ChromaticPSFFitWorkspace method) (spectractor.extractor.extractor.FullForwardModelFitWorkspace method) (spectractor.extractor.psf.DoubleMoffat method) (spectractor.extractor.psf.Gauss method) (spectractor.extractor.psf.Moffat method) (spectractor.extractor.psf.MoffatGauss method) (spectractor.extractor.psf.Order0 method) (spectractor.extractor.psf.PSF method) (spectractor.extractor.psf.PSFFitWorkspace method) (spectractor.extractor.spectrum.MultigaussAndBgdFitWorkspace method) (spectractor.fit.fit_spectrogram.SpectrogramFitWorkspace method) (spectractor.fit.fitter.FitWorkspace method)

json_filename (spectractor.fit.fitter.FitParameters property)

L

label (spectractor.fit.fitter.FitParameter attribute), [1] labels (spectractor.fit.fitter.FitParameters attribute), [1] lambda_ref (spectractor.extractor.spectrum.Spectrum attribute) lambdas (spectractor.extractor.spectrum.Spectrum attribute) lambdas_binwidths (spectractor.extractor.spectrum.Spectrum attribute) Led (class in spectractor.extractor.targets) level (spectractor.simulation.image_simulation.BackgroundModel attribute) Libradtran (class in spectractor.simulation.libradtran) Line (class in spectractor.extractor.spectroscopy) line() (in module spectractor.tools) Lines (class in spectractor.extractor.spectroscopy) lines (spectractor.extractor.spectrum.Spectrum attribute) lnlike() (spectractor.fit.fitter.FitWorkspace method) lnprob_spectrogram() (in module spectractor.fit.fit_spectrogram) load() (spectractor.extractor.targets.ArcLamp method) (spectractor.extractor.targets.Led method) (spectractor.extractor.targets.Monochromator method) (spectractor.extractor.targets.Star method) load_AUXTEL_image() (in module spectractor.extractor.images) load_calspec() (spectractor.extractor.targets.Star method) load_chromatic_psf() (spectractor.extractor.spectrum.Spectrum method) load_config() (in module spectractor.config) (spectractor.extractor.dispersers.Disperser method)

load_CTIO_image() (in module spectractor.extractor.images) load_emission_spectrum() (spectractor.extractor.targets.Star method) load_file() (spectractor.simulation.atmosphere.AtmosphereGrid method) load_files() (spectractor.extractor.dispersers.Disperser method) load_filter() (spectractor.extractor.spectrum.Spectrum method) load_fits() (in module spectractor.tools) load_gaia() (spectractor.extractor.targets.Star method) load_image() (spectractor.extractor.images.Image method) (spectractor.simulation.image_simulation.ImageModel method) load_LPNHE_image() (in module spectractor.extractor.images) load_ned() (spectractor.extractor.targets.Star method) load_PSF() (in module spectractor.extractor.psf) load_spectra() (spectractor.extractor.targets.Star method) load_spectrogram() (spectractor.extractor.spectrum.Spectrum method) load_spectrum() (spectractor.extractor.spectrum.Spectrum method) load_spectrum_latest() (spectractor.extractor.spectrum.Spectrum method) load_spectrum_older_24() (spectractor.extractor.spectrum.Spectrum method) load_STARDICE_image() (in module spectractor.extractor.images) load_target() (in module spectractor.extractor.targets) load_transmission() (spectractor.simulation.throughput.TelescopeTransmission method) load_transmission_file() (in module spectractor.simulation.throughput) load_wcs_from_file() (in module spectractor.tools) LogBook (class in spectractor.logbook)

M

mask (spectractor.extractor.images.Image attribute) mask_cosmics() (in module spectractor.tools) mask_rotated (spectractor.extractor.images.Image attribute) model() (spectractor.simulation.image_simulation.BackgroundModel method) (spectractor.simulation.image_simulation.FlatModel method) (spectractor.simulation.image_simulation.StarFieldModel method) module spectractor spectractor.config spectractor.extractor spectractor.extractor.chromaticpsf spectractor.extractor.dispersers spectractor.extractor.extractor spectractor.extractor.images spectractor.extractor.psf spectractor.extractor.spectroscopy spectractor.extractor.spectrum spectractor.extractor.targets spectractor.fit spectractor.fit.fit_spectrogram spectractor.fit.fitter spectractor.logbook spectractor.parameters spectractor.simulation spectractor.simulation.atmosphere spectractor.simulation.image_simulation spectractor.simulation.libradtran spectractor.simulation.simulator spectractor.simulation.throughput spectractor.tools

Moffat (class in spectractor.extractor.psf) MoffatGauss (class in spectractor.extractor.psf) Monochromator (class in spectractor.extractor.targets) multigauss_and_bgd() (in module spectractor.tools) multigauss_and_bgd_jacobian() (in module spectractor.tools) multigauss_and_line() (in module spectractor.tools) MultigaussAndBgdFitWorkspace (class in spectractor.extractor.spectrum) my_logger (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute)

N

N() (spectractor.extractor.dispersers.Disperser method) N_flat() (spectractor.extractor.dispersers.Disperser method) ndim (spectractor.fit.fitter.FitParameters property) neutral_lines() (in module spectractor.extractor.dispersers) nfixed (spectractor.fit.fitter.FitParameters property)

nfree (spectractor.fit.fitter.FitParameters property) NumpyArrayEncoder (class in spectractor.tools) Nx (spectractor.simulation.image_simulation.BackgroundModel attribute) (spectractor.simulation.image_simulation.FlatModel attribute) Ny (spectractor.simulation.image_simulation.BackgroundModel attribute) (spectractor.simulation.image_simulation.FlatModel attribute)

O

order (spectractor.extractor.spectrum.Spectrum attribute)

Order0 (class in spectractor.extractor.psf) order01_positions() (in module spectractor.extractor.dispersers)

P

parallactic_angle (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) patchSimbadURL() (in module spectractor.extractor.targets) pixel_rotation() (in module spectractor.tools) plot_atomic_lines() (spectractor.extractor.spectroscopy.Lines method) plot_columns_vs_date() (spectractor.logbook.LogBook method) plot_comparison_truth() (in module spectractor.extractor.extractor) plot_compass_simple() (in module spectractor.tools) plot_correlation_matrix() (spectractor.fit.fitter.FitParameters method) plot_correlation_matrix_simple() (in module spectractor.tools) plot_covariance_matrix() (in module spectractor.tools) plot_detected_lines() (spectractor.extractor.spectroscopy.Lines method) plot_fit() (spectractor.extractor.chromaticpsf.ChromaticPSFFitWorkspace method) (spectractor.extractor.extractor.FullForwardModelFitWorkspace method) (spectractor.extractor.psf.PSFFitWorkspace method) (spectractor.fit.fit_spectrogram.SpectrogramFitWorkspace method) (spectractor.fit.fitter.FitWorkspace method) (spectractor.fit.fitter.RegFitWorkspace method) plot_gradient_descent() (spectractor.fit.fitter.FitWorkspace method) plot_image() (spectractor.extractor.images.Image method) plot_image_simple() (in module spectractor.tools) plot_model() (spectractor.simulation.image_simulation.BackgroundModel method) (spectractor.simulation.image_simulation.FlatModel method) (spectractor.simulation.image_simulation.StarFieldModel method) (spectractor.simulation.image_simulation.StarModel method)

plot_spectra() (spectractor.extractor.targets.Star method) plot_spectrogram() (spectractor.extractor.spectrum.Spectrum method) plot_spectrogram_comparison_simple() (spectractor.extractor.extractor.FullForwardModelFitWorkspace method) (spectractor.fit.fit_spectrogram.SpectrogramFitWorkspace method) plot_spectrum() (spectractor.extractor.spectrum.Spectrum method) plot_spectrum_simple() (in module spectractor.tools) plot_spectrum_summary() (spectractor.extractor.spectrum.Spectrum method) plot_statistical_error() (spectractor.extractor.images.Image method) plot_summary() (spectractor.extractor.chromaticpsf.ChromaticPSF method) plot_table_in_axis() (in module spectractor.tools) plot_transmission() (spectractor.extractor.dispersers.Disperser method) (spectractor.simulation.atmosphere.Atmosphere method) (spectractor.simulation.atmosphere.AtmosphereGrid method) (spectractor.simulation.throughput.TelescopeTransmission method) plot_transmission_image() (spectractor.simulation.atmosphere.AtmosphereGrid method) plot_transmission_simple() (in module spectractor.simulation.throughput) plot_triangle_fisher() (spectractor.fit.fitter.FitWorkspace method) prepare_weight_matrices() (spectractor.fit.fitter.FitWorkspace method) pressure (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) print_parameters_summary() (spectractor.fit.fitter.FitParameters method) print_regularisation_summary() (spectractor.fit.fitter.RegFitWorkspace method) PSF (class in spectractor.extractor.psf) psf (spectractor.extractor.spectrum.Spectrum attribute) PSFFitWorkspace (class in spectractor.extractor.psf)

R

ra (spectractor.extractor.images.Image attribute) randomness_level (spectractor.simulation.image_simulation.FlatModel attribute) read_fitparameter_json() (in module spectractor.fit.fitter) rebin() (in module spectractor.tools) (spectractor.extractor.images.Image method) refraction_angle() (spectractor.extractor.dispersers.Disperser method) refraction_angle_lambda() (spectractor.extractor.dispersers.Disperser method) RegFitWorkspace (class in spectractor.fit.fitter) rescale_x_from_legendre() (in module spectractor.tools) rescale_x_to_legendre() (in module spectractor.tools) reset_lambda_range() (spectractor.simulation.throughput.TelescopeTransmission method) reset_x() (spectractor.extractor.spectrum.MultigaussAndBgdFitWorkspace method) resize_table() (spectractor.extractor.chromaticpsf.ChromaticPSF method) resolution_operator() (in module spectractor.tools)

rho (spectractor.fit.fitter.FitParameters property) rotate_table() (spectractor.extractor.chromaticpsf.ChromaticPSF method) rotation_angle (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) run() (spectractor.simulation.libradtran.Libradtran method) run_ffm_minimisation() (in module spectractor.extractor.extractor) run_gradient_descent() (in module spectractor.fit.fitter) run_minimisation() (in module spectractor.fit.fitter) run_minimisation_sigma_clipping() (in module spectractor.fit.fitter) run_multigaussandbgd_minimisation() (in module spectractor.extractor.spectrum) run_regularisation() (spectractor.fit.fitter.RegFitWorkspace method) run_simple_newton_minimisation() (in module spectractor.fit.fitter) run_spectrogram_deconvolution_psf2d() (in module spectractor.extractor.extractor) run_spectrogram_minimisation() (in module spectractor.fit.fit_spectrogram)

S

saturation (spectractor.extractor.images.Image attribute) save_file() (spectractor.simulation.atmosphere.AtmosphereGrid method) save_fits() (in module spectractor.tools) save_gradient_descent() (spectractor.fit.fitter.FitWorkspace method) save_image() (spectractor.extractor.images.Image method) (spectractor.simulation.image_simulation.ImageModel method) save_spectrogram() (spectractor.extractor.spectrum.Spectrum method) save_spectrum() (spectractor.extractor.spectrum.Spectrum method) search_for_image() (spectractor.logbook.LogBook method) set() (spectractor.fit.fitter.FitParameters method) set_bounds() (spectractor.extractor.chromaticpsf.ChromaticPSF method) set_bounds_for_minuit() (spectractor.extractor.chromaticpsf.ChromaticPSF method) set_epsilon() (spectractor.fit.fitter.FitWorkspace method) set_gaia_catalog_file_name() (in module spectractor.tools) set_grid() (spectractor.simulation.atmosphere.AtmosphereGrid method) set_label() (spectractor.simulation.atmosphere.Atmosphere method) set_lambda_range() (spectractor.simulation.atmosphere.Atmosphere method) set_logger() (in module spectractor.config) set_mask() (spectractor.extractor.chromaticpsf.ChromaticPSFFitWorkspace method) (spectractor.extractor.extractor.FullForwardModelFitWorkspace method) (spectractor.fit.fit_spectrogram.SpectrogramFitWorkspace method) set_pixels() (spectractor.extractor.chromaticpsf.ChromaticPSF method) set_polynomial_degrees() (spectractor.extractor.chromaticpsf.ChromaticPSF method) set_rectangular_boundaries() (spectractor.extractor.chromaticpsf.ChromaticPSF static method) set_regularisation_with_Ndof() (spectractor.fit.fitter.RegFitWorkspace method) set_sources_file_name() (in module spectractor.tools) set_star_list() (spectractor.simulation.image_simulation.StarFieldModel method) set_title() (spectractor.simulation.atmosphere.Atmosphere method) set_true_spectrum() (spectractor.simulation.simulator.SpectrogramModel method) set_wcs_file_name() (in module spectractor.tools) set_wcs_output_directory() (in module spectractor.tools) set_wcs_tag() (in module spectractor.tools) simple_newton_minimisation() (in module spectractor.fit.fitter) simulate() (spectractor.extractor.chromaticpsf.ChromaticPSFFitWorkspace method) (spectractor.extractor.extractor.FullForwardModelFitWorkspace method) (spectractor.extractor.psf.PSFFitWorkspace method) (spectractor.extractor.spectrum.MultigaussAndBgdFitWorkspace method) (spectractor.fit.fit_spectrogram.SpectrogramFitWorkspace method) (spectractor.fit.fitter.FitWorkspace method) (spectractor.fit.fitter.RegFitWorkspace method) (spectractor.simulation.atmosphere.Atmosphere method) (spectractor.simulation.atmosphere.AtmosphereGrid method) (spectractor.simulation.libradtran.Libradtran method) (spectractor.simulation.simulator.SpectrogramModel method) (spectractor.simulation.simulator.SpectrumSimulation method) simulate_spectrum() (spectractor.simulation.simulator.SpectrogramModel method) simulate_starfield_with_gaia() (spectractor.extractor.images.Image method) simulate_without_atmosphere() (spectractor.simulation.simulator.SpectrumSimulation method) sort_lines() (spectractor.extractor.spectroscopy.Lines method) spectractor module Spectractor() (in module spectractor.extractor.extractor) spectractor.config module spectractor.extractor module spectractor.extractor.chromaticpsf module spectractor.extractor.dispersers module spectractor.extractor.extractor module spectractor.extractor.images module

spectractor.extractor.psf module spectractor.extractor.spectroscopy module spectractor.extractor.spectrum module spectractor.extractor.targets module spectractor.fit module spectractor.fit.fit_spectrogram module spectractor.fit.fitter module spectractor.logbook module spectractor.parameters module spectractor.simulation module spectractor.simulation.atmosphere module spectractor.simulation.image_simulation module spectractor.simulation.libradtran module spectractor.simulation.simulator module spectractor.simulation.throughput module spectractor.tools module SpectractorInit() (in module spectractor.extractor.extractor) SpectractorRun() (in module spectractor.extractor.extractor) spectrogram_bgd (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_bgd_rms (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_data (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_deg (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_err (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_fit (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_flat (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_mask (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_Nx (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_Ny (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_residuals (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_saturation (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_starfield (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_x0 (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_xmax (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_xmin (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_y0 (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_ymax (spectractor.extractor.spectrum.Spectrum attribute) spectrogram_ymin (spectractor.extractor.spectrum.Spectrum attribute) SpectrogramFitWorkspace (class in spectractor.fit.fit_spectrogram) SpectrogramModel (class in spectractor.simulation.simulator) Spectrum (class in spectractor.extractor.spectrum) SpectrumSimulation (class in spectractor.simulation.simulator) Star (class in spectractor.extractor.targets) starfield (spectractor.extractor.images.Image attribute) starfield_rotated (spectractor.extractor.images.Image attribute) StarFieldModel (class in spectractor.simulation.image_simulation) StarModel (class in spectractor.simulation.image_simulation)

T

Target (class in spectractor.extractor.targets) target (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) target_bkgd2D (spectractor.extractor.images.Image attribute) target_label (spectractor.extractor.images.Image attribute) target_pixcoords (spectractor.extractor.images.Image attribute) target_pixcoords_rotated (spectractor.extractor.images.Image attribute) target_star2D (spectractor.extractor.images.Image attribute) TelescopeTransmission (class in spectractor.simulation.throughput)

temperature (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute) theta() (spectractor.extractor.dispersers.Disperser method) theta_flat() (spectractor.extractor.dispersers.Disperser method) throughput (spectractor.extractor.spectrum.Spectrum attribute) tied_circular_gauss2d() (in module spectractor.tools) truth (spectractor.fit.fitter.FitParameter attribute), [1] (spectractor.fit.fitter.FitParameters attribute), [1] turn_image() (in module spectractor.extractor.images) txt_filename (spectractor.fit.fitter.FitParameters property)

U

units (spectractor.extractor.images.Image attribute) (spectractor.extractor.spectrum.Spectrum attribute)

update() (spectractor.extractor.chromaticpsf.ChromaticPSF method) update_derived_parameters() (in module spectractor.config) uvspec_available() (in module spectractor.tools)

V

value (spectractor.fit.fitter.FitParameter attribute), [1]

values (spectractor.fit.fitter.FitParameters attribute), [1]

W

wavelength_to_rgb() (in module spectractor.tools) wcs (spectractor.extractor.images.Image attribute) weighted_avg_and_std() (in module spectractor.tools)

weighted_residuals() (spectractor.fit.fitter.FitWorkspace method) write_fitparameter_json() (in module spectractor.fit.fitter) write_json() (spectractor.fit.fitter.FitParameters method) write_text() (spectractor.fit.fitter.FitParameters method)

X

x0 (spectractor.extractor.spectrum.Spectrum attribute) (spectractor.simulation.image_simulation.StarModel attribute)

Y

y0 (spectractor.simulation.image_simulation.StarModel attribute)